PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0218s0064.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 179aa    MW: 19330.7 Da    PI: 7.3505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0218s0064.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP228.53.7e-094292853
                  AP2 28 rkrfslgkfgtaeeAakaaiaarkkl 53
                         ++r +lg+f taeeAa+a+++a+  +
  Kalax.0218s0064.1.p  4 KRRLWLGTFETAEEAARAYDQAAVLM 29
                         49********************9765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.5E-10145IPR001471AP2/ERF domain
PROSITE profilePS5103213.933139IPR001471AP2/ERF domain
PfamPF008471.2E-5226IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-18339IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-12340IPR016177DNA-binding domain
CDDcd000182.28E-17441No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MCRKRRLWLG TFETAEEAAR AYDQAAVLMS GRNAKTNFPI DQTDHNPNDS PNDKKGGLSR  60
SSSSNNMTLS EILHAKLKKC TKALSPSLTC LRLDTEKSNI GVWQKRAGSG SDANWVMTVE  120
LGGKSAVKGE GGGVNKGSTG MGFGMEWKSE DENAGGETVK NDEERIALQM IEELLFSN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012448291.13e-60PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X1
RefseqXP_012448292.13e-60PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X2
RefseqXP_012448293.13e-60PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X3
RefseqXP_012448294.12e-60PREDICTED: ethylene-responsive transcription factor WIN1-like isoform X4
SwissprotQ9XI339e-50WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLA0A0D2TB243e-60A0A0D2TB24_G
TrEMBLA0A0D2TGY03e-60A0A0D2TGY0_G
TrEMBLA0A0D2UDZ22e-60A0A0D2UDZ2_G
STRINGPOPTR_0006s06870.15e-56(Populus trichocarpa)
STRINGGLYMA13G23570.11e-55(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-39ERF family protein